Displaying ARID Family from Rice  
Information about ARID family
The ARID family of DNA binding proteins are characterized by the presence of an AT-rich interactive domain (ARID) which bind AT-rich DNA sequences in a not necessarily sequence specific fashion. The consensus sequence occurs in proteins from all sequenced eukaryotic organisms. The basic structure of the domain appears to be a series of six helices separated by ß-strands, loops, or turns, but the structured region may extend to an additional helix at either or both ends of the basic six. Most ARID family members have not been characterized with respect to their DNA-binding behavior, but it is already apparent that not all ARIDs conform to the pattern of binding AT-rich sequences. The ARID family is subdivided into 7 distinct families based on sequence identity among members (PMID:11959810). Five out of the 7 ARID families bind DNA without sequence specificity (PMC:546134).
Pubmed Links: 11959810     

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Protein Name
[Suggested/Accepted]
Synonym/
Gene Name
Gene Id
[ TIGR ]
RAP-DB Id
[ RAP-DB ]
DNA Binding Preferences
Binding SiteNFM
Targeting
TFs
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OsARID1LOC_Os02g27060Os02g0469900 Available
OsARID2LOC_Os02g48370Os02g0714300
OsARID3LOC_Os06g41730Os06g0622300
OsARID4LOC_Os08g35000Os08g0451400
OsARID5LOC_Os09g26390Os09g0434000
OsARID6LOC_Os09g37250Os09g0544500
6 results found