Displaying C3H Family from Rice  
Information about C3H family
The CCCH (C3H) zinc finger motif is a nucleic acid binding motif that is described in proteins with diverse functions in many different pathways in plants. A typical CCCH protein usually contains 1-6 CCCH-type zinc finger motifs. Based on the different numbers of amino acid spacers between cysteines and histidines in the CCCH motif, a consensus sequence for these motifs was defined as C-X4-15-C-X4-6-C-X3-H (X represents any amino acid) based on the whole-genome analysis of rice and Arabidopsis CCCH proteins. The domain has been shown in proteins that bind to single stranded DNA and RNA (PMC:3391233).
(Taken from AGRIS)

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Protein Name
[Suggested/Accepted]
Synonym/
Gene Name
Gene Id
[ TIGR ]
RAP-DB Id
[ RAP-DB ]
DNA Binding Preferences
Binding SiteNFM
Targeting
TFs
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in TFome
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OsC3H1LOC_Os01g07930Os01g0174600
OsC3H2LOC_Os01g09620Os01g0192000 Available
OsC3H3LOC_Os01g14870Os01g0252200
OsC3H4LOC_Os01g15300Os01g0256800
OsC3H5LOC_Os01g15350Os01g0257400
OsC3H6LOC_Os01g15460Os01g0258700
OsC3H7LOC_Os01g39100Os01g0572100
OsC3H8LOC_Os01g42970Os01g0616400
OsC3H9LOC_Os01g45730Os01g0645000
OsC3H12LOC_Os01g68860Os01g0917400
OsC3H13LOC_Os02g06584
OsC3H14LOC_Os02g10080Os02g0194200
OsC3H15LOC_Os02g19804Os02g0301000
OsC3H16LOC_Os02g35150Os02g0557500
OsC3H17LOC_Os02g45480Os02g0677700
OsC3H21LOC_Os03g18950Os03g0301500
OsC3H22LOC_Os03g21140Os03g0328900
OsC3H23LOC_Os03g21160Os03g0329200
OsC3H24LOC_Os03g49170Os03g0698800
OsC3H25LOC_Os03g61110Os03g0826400
OsC3H26LOC_Os04g01480Os04g0105000
OsC3H30LOC_Os04g41060Os04g0487550
OsC3H32LOC_Os04g57010Os04g0665700
OsC3H34LOC_Os05g03760Os05g0128200
OsC3H36LOC_Os05g10670Os05g0195101
OsC3H38LOC_Os05g45020Os05g0525900
OsC3H39LOC_Os05g48960Os05g0564200
OsC3H40LOC_Os05g50080Os05g0576300
OsC3H42LOC_Os06g21390Os06g0318700
OsC3H43LOC_Os06g32720Os06g0519400
OsC3H44LOC_Os06g32860Os06g0520600
OsC3H45LOC_Os06g41384Os06g0618100
OsC3H49LOC_Os06g46890Os06g0682800
OsC3H50LOC_Os06g49080Os06g0704300
OsC3H51LOC_Os07g04580Os07g0138400
OsC3H52LOC_Os07g04650Os07g0139000
OsC3H54LOC_Os07g38090Os07g0568300
OsC3H56LOC_Os07g48410Os07g0682400
OsC3H59LOC_Os08g06330Os08g0159800
OsC3H60LOC_Os08g38370Os08g0491700
OsC3H61LOC_Os09g13530Os09g0305900
OsC3H63LOC_Os09g31482Os09g0491756
OsC3H65LOC_Os10g25220Os10g0391300
OsC3H66LOC_Os11g28270Os11g0472000
OsC3H68LOC_Os12g18120Os12g0278800
OsC3H69LOC_Os12g21700Os12g0405100
46 results found