Displaying C3H Family from Brachypodium  
Information about C3H family
The CCCH (C3H) zinc finger motif is a nucleic acid binding motif that is described in proteins with diverse functions in many different pathways in plants. A typical CCCH protein usually contains 1-6 CCCH-type zinc finger motifs. Based on the different numbers of amino acid spacers between cysteines and histidines in the CCCH motif, a consensus sequence for these motifs was defined as C-X4-15-C-X4-6-C-X3-H (X represents any amino acid) based on the whole-genome analysis of rice and Arabidopsis CCCH proteins. The domain has been shown in proteins that bind to single stranded DNA and RNA (PMC:3391233).
(Taken from AGRIS)

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Protein Name
[Suggested/Accepted]
Synonym/
Gene Name
Gene Id
[ Brachypodium.org ]
DNA Binding Preferences
Binding SiteNFM
Targeting
TFs
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in TFome
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BdC3H1Bradi1g03270
BdC3H2Bradi1g11760
BdC3H3Bradi1g17510
BdC3H4Bradi1g23370
BdC3H5Bradi1g24270
BdC3H6Bradi1g32977
BdC3H7Bradi1g34507
BdC3H8Bradi1g35920
BdC3H9Bradi1g42720
BdC3H10Bradi1g63570
BdC3H11Bradi1g64800
BdC3H12Bradi2g05750
BdC3H13Bradi2g08905
BdC3H14Bradi2g09177
BdC3H15Bradi2g09340
BdC3H16Bradi2g09350
BdC3H17Bradi2g14130
BdC3H18Bradi2g15670
BdC3H19Bradi2g16520
BdC3H20Bradi2g33270
BdC3H21Bradi2g38247
BdC3H22Bradi2g43600
BdC3H23Bradi2g45090
BdC3H24Bradi2g46080
BdC3H25Bradi2g57335
BdC3H26Bradi2g58770
BdC3H27Bradi3g06940
BdC3H28Bradi3g06950
BdC3H29Bradi3g06957
BdC3H30Bradi3g09570
BdC3H31Bradi3g14480
BdC3H32Bradi3g16360
BdC3H33Bradi3g16377
BdC3H34Bradi3g45896
BdC3H35Bradi3g45902
BdC3H36Bradi3g51650
BdC3H37Bradi4g08050
BdC3H38Bradi4g19010
BdC3H39Bradi4g33870
BdC3H40Bradi4g39137
BdC3H41Bradi4g44040
BdC3H42Bradi5g02310
BdC3H43Bradi5g25340
BdC3H44Bradi5g25760
44 results found