Displaying JUMONJI Family from Brachypodium  
Information about JUMONJI family
The jumonji (jmj) gene was identified by a mouse gene trap approach and has essential roles in the development of multiple tissues. The Jmj protein has a DNA binding domain, ARID, and two conserved jmj domains (jmjN and jmjC). In many diverse species including bacteria, fungi, plants, and animals, there are many jumonji family proteins that have only the jmjC domain or both jmj domains. Recently, Jmj protein was found to be a transcriptional repressor. Several proteins in the jumonji family are involved in transcriptional repression and/or chromatin regulation (PMID:16715513). The jmjC-domain containing proteins were found to be able to remove histone methyl groups. Multiple JmjC domain-containing histone demethylases have been identified in animal cells, which are divided into distinct groups according to sequence similarities, including JARID/KDM5, JMJD1/JHDM2/KDM3, JMJD2/KDM4, JMJD3/KDM6, JHDM1/FBX/KDM2 and the "JmjC domain-only" group. Different groups target specific histone lysines at different methylation states. Rice and Arabidopsis contain Jmj proteins that are important for the regulation of gene expression in those respective organisms (PMID:21419882).
Pubmed Links: 16715513     21419882     

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Protein Name
[Suggested/Accepted]
Synonym/
Gene Name
Gene Id
[ Brachypodium.org ]
DNA Binding Preferences
Binding SiteNFM
Targeting
TFs
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in TFome
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BdJMJ1Bradi1g35180
BdJMJ2Bradi1g60740
BdJMJ3Bradi1g62640
BdJMJ4Bradi1g74997
BdJMJ5Bradi2g14600
BdJMJ6Bradi2g31107
BdJMJ7Bradi2g40677
BdJMJ8Bradi2g58130
BdJMJ9Bradi3g01060
BdJMJ10Bradi3g34240
BdJMJ11Bradi3g36180
BdJMJ12Bradi3g39457
BdJMJ13Bradi4g11440
BdJMJ14Bradi4g16020
BdJMJ15Bradi4g27417
BdJMJ16Bradi4g29617
BdJMJ17Bradi4g39130
17 results found