Displaying MADS Family from Brachypodium  
Information about MADS family
"MADS-box genes are a family of transcription factors found in plants, animals and fungi and are characterized by a conserved MADS domain. MADS-box genes have been found in all major plant lineages studied to date including green algae, mosses, ferns, gymnosperms and angiosperms. In Arabidopsis, MADS-box genes can be divided into three groups: Type I and Type II MADS box genes and MADS-like genes. Type II MADS box genes in plants can be further subdivided into the MIKCC and MIKC* types (reviewed in (Becker and Theissen, 2003)). Type I MADS-box genes contain a conserved MADS-box gene, but lack the relatively conserved I and K and highly divergent C domains found in the Type II MIKC type MADS-box genes.
Function has been characterized for less than one fifth of the members of the MADS-box gene family. However, in recent years several thorough expression and evolutionary studies have been published investigating the underlying similarities and differences among these genes, especially the TYPE II MIKCC genes.
Among the TYPE II MIKC genes there have been approximately 19 genes that have been functionally characterized. These genes include many of the so called floral MADS-box genes (Theissen et al., 2000). These genes, along with other genes that have been less well characterized but are hypothesized to preferentially affect floral organ development, includes AGAMOUS (AG), AGL6, AGL13, APETALA1 (AP1), APETALA3 (AP3), CAULIFLOWER (CAL), PISTILLATA (PI), SEEDSTICK (STK), SEPALLATA1,2,3,4 (SEP1,2,3,4), SHATTERPROOF1 and 2 (SHP1, 2) and TRANSPARENT TESTA16 (TT16). Additionally, several genes with either identified or hypothesized function regulating floral timing and inflorescence development have been identified including AGL24, AGL27, FLOWERING LOCUS C (FLC) (also known as FLOWERING LOCUS F (FLF)), FLC1, FLC2, FLOWERING LOCUS M (FLM) (also known as MADS AFFECTING FLOWERING1 (MAF1), FRUITFUL (FUL), SHORT VEGETATIVE PHASE (SVP) and SUPRESSOR OF CONSTANS (SOC1). Lastly, there are the non-floral genes, a group that mostly have currently unknown function. These genes have diverse expression that most likely reflects a multitude of function including floral development as well as root, seed, seedling, stem and leaf development. These genes include AGL12, AGL14, AGL15, AGL16, AGL17, AGL18, AGL19, AGL21 and ANR1.
In contrast to the many studies of TYPE II MIKC MADS box genes, only one Type I MADS-box gene, PHERES1 (formerly AGL37), has been investigated to date. The function of PHERES1 has not yet been described, but based on expression studies it is maternally regulated by MEDEA and appears to be involved in proper seed and embryo development (Kohler et al., 2003; Kohler et al., 2005). With the multitude of recent advances in analyses of gene expression and genomics we can expect many more studies of the pathways involving previously unidentified MADS-box genes along with functional characterization of these genes."
(Taken from AGRIS)

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Protein Name
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Gene Id
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DNA Binding Preferences
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BdMADS1Bradi1g08326
BdMADS2Bradi1g08340
BdMADS3Bradi1g15480
BdMADS4Bradi1g20090
BdMADS5Bradi1g21980
BdMADS6Bradi1g27900
BdMADS7Bradi1g32210
BdMADS8Bradi1g35000
BdMADS9Bradi1g39927
BdMADS10Bradi1g45807
BdMADS11Bradi1g48520
BdMADS12Bradi1g57410
BdMADS13Bradi1g57420
BdMADS14Bradi1g57870
BdMADS15Bradi1g58100
BdMADS16Bradi1g59250
BdMADS17Bradi1g69890
BdMADS18Bradi1g72150
BdMADS19Bradi1g77020
BdMADS20Bradi2g06330
BdMADS21Bradi2g24940
BdMADS22Bradi2g25090
BdMADS23Bradi2g26320
BdMADS24Bradi2g30530
BdMADS25Bradi2g32910
BdMADS26Bradi2g43290
BdMADS27Bradi2g48690
BdMADS28Bradi2g57000
BdMADS29Bradi2g59120
BdMADS30Bradi2g59187
BdMADS31Bradi3g00730
BdMADS32Bradi3g04880
BdMADS33Bradi3g05260
BdMADS34Bradi3g13570
BdMADS35Bradi3g18670
BdMADS36Bradi3g32090
BdMADS37Bradi3g39177
BdMADS38Bradi3g41260
BdMADS39Bradi3g41297
BdMADS40Bradi3g46920
BdMADS41Bradi3g51800
BdMADS42Bradi3g57017
BdMADS43Bradi3g58220
BdMADS44Bradi4g06867
BdMADS45Bradi4g11097
BdMADS46Bradi4g30090
BdMADS47Bradi4g34680
BdMADS48Bradi4g39420
BdMADS49Bradi4g40350
BdMADS50Bradi4g40357
BdMADS51Bradi4g40940
BdMADS52Bradi5g08027
BdMADS53Bradi5g11270
BdMADS54Bradi5g12440
BdMADS55Bradi5g21700
55 results found