Displaying ARID Family from Rice


INFORMATION ABOUT ARID FAMILY

The ARID family of DNA binding proteins are characterized by the presence of an AT-rich interactive domain (ARID) which bind AT-rich DNA sequences in a not necessarily sequence specific fashion. The consensus sequence occurs in proteins from all sequenced eukaryotic organisms. The basic structure of the domain appears to be a series of six helices separated by ß-strands, loops, or turns, but the structured region may extend to an additional helix at either or both ends of the basic six. Most ARID family members have not been characterized with respect to their DNA-binding behavior, but it is already apparent that not all ARIDs conform to the pattern of binding AT-rich sequences. The ARID family is subdivided into 7 distinct families based on sequence identity among members (PMID:11959810). Five out of the 7 ARID families bind DNA without sequence specificity (PMC:546134).


Protein Name
accepted / suggested
Gene Locus Synonym/
Gene Name
Clone in TFome Genome Browser
OsARID1 LOC_Os02g27060 pUT1549 View in Browser
OsARID2 LOC_Os02g48370 View in Browser
OsARID3 LOC_Os06g41730 View in Browser
OsARID4 LOC_Os08g35000 View in Browser
OsARID5 LOC_Os09g26390 View in Browser
OsARID6 LOC_Os09g37250 View in Browser