Displaying ARID Family from Sorghum


INFORMATION ABOUT ARID FAMILY

The ARID family of DNA binding proteins are characterized by the presence of an AT-rich interactive domain (ARID) which bind AT-rich DNA sequences in a not necessarily sequence specific fashion. The consensus sequence occurs in proteins from all sequenced eukaryotic organisms. The basic structure of the domain appears to be a series of six helices separated by ß-strands, loops, or turns, but the structured region may extend to an additional helix at either or both ends of the basic six. Most ARID family members have not been characterized with respect to their DNA-binding behavior, but it is already apparent that not all ARIDs conform to the pattern of binding AT-rich sequences. The ARID family is subdivided into 7 distinct families based on sequence identity among members (PMID:11959810). Five out of the 7 ARID families bind DNA without sequence specificity (PMC:546134).


Protein Name
accepted / suggested
Gene Locus Synonym/
Gene Name
Clone in TFome Genome Browser
SbARID1 Sb01g020470 View in Browser
SbARID2 Sb02g025515 View in Browser
SbARID3 Sb04g017850 View in Browser
SbARID4 Sb04g029990 View in Browser
SbARID5 Sb07g022155 View in Browser
SbARID6 Sb10g024400 View in Browser
SbARID7 Sb10g031260 View in Browser