Displaying ARID Family from Sugarcane


INFORMATION ABOUT ARID FAMILY

The ARID family of DNA binding proteins are characterized by the presence of an AT-rich interactive domain (ARID) which bind AT-rich DNA sequences in a not necessarily sequence specific fashion. The consensus sequence occurs in proteins from all sequenced eukaryotic organisms. The basic structure of the domain appears to be a series of six helices separated by ß-strands, loops, or turns, but the structured region may extend to an additional helix at either or both ends of the basic six. Most ARID family members have not been characterized with respect to their DNA-binding behavior, but it is already apparent that not all ARIDs conform to the pattern of binding AT-rich sequences. The ARID family is subdivided into 7 distinct families based on sequence identity among members (PMID:11959810). Five out of the 7 ARID families bind DNA without sequence specificity (PMC:546134).


Protein Name
[ accepted / suggested]
Gene Locus Synonym/
Gene Name
Clone in TFome Genome Browser
ScARID1 PTSo00132.1 View in Browser
ScARID2 PTSo00131.1 View in Browser
ScARID3 PTSo00133.1 View in Browser
ScARID4 SCEZLB1009B04.g View in Browser
ScARID5 SCSGAM2077G06.g View in Browser
ScARID6 SCEPRZ3046F02.g View in Browser
ScARID7 SCRFLR1012E09.g View in Browser
ScARID8 SCJLAM2091B03.g View in Browser