Displaying LBD Family from Maize


INFORMATION ABOUT LBD FAMILY

The plant-specific LBD (Lateral Organ Boundaries Domain) gene family is essential in the regulation of plant lateral organ development and are involved in almost all aspects of plant development, including embryo, root, leaf, and inflorescence development, as the regulation of anthocyanin and nitrogen metabolism. These genes participate in the definition of the boundary that separates lateral organs from adjacent tissue. LBD proteins contain a characteristic LOB domain composed of a C-motif required for DNA-binding which contains four perfectly conserved cysteine (C) residues in a CX2CX6CX3C motif where X are residues that are not conserved, a conserved glycine residue, and a leucine-zipper-like sequence that includes five hydrophobic amino acids (valine, isoleucine, leucine) separated by six variable amino acid residues as a probable protein dimerization domain required for PPIs (protein protein interactions). Phylogenetic reconstructions of the Arabidopsis, rice and maize LBD genes suggest two major classes of LBD genes which are characterized by the presence (class I) or absence (class II) of functional leucine-zipper-like domains. The majority of LBD genes belong to class I. LOB domain proteins are suggested to act as transcription factors based on their nuclear localization and their capacity to bind to the DNA motif 5' GCGGCG 3' (PMID:20961800).


Protein Name
accepted / suggested
Gene Locus Synonym/
Gene Name
Clone in TFome Genome Browser
ZmLBD1 GRMZM2G092483 LBD1 pUT6657 View in Browser
ZmLBD2 GRMZM2G092542 RTCS1 pUT4616 View in Browser
ZmLBD3 GRMZM2G110913 LBD3 View in Browser
ZmLBD4 GRMZM2G021095 LBD4 pUT4741 View in Browser
ZmLBD5 GRMZM2G060544 LBD5 pUT6709 View in Browser
ZmLBD6 GRMZM2G044902 LBD6 pUT5558 View in Browser
ZmLBD7 GRMZM2G076327 LBD7 pUT4040 View in Browser
ZmLBD8 GRMZM2G132667 LBD8 pUT4104 View in Browser
ZmLBD9 AC217910.3_FG006 LBD9 pUT5712 View in Browser
ZmLBD10 GRMZM2G154320 LBD10 pUT4446 View in Browser
ZmLBD11 GRMZM2G017319 LBD11 pUT6768 View in Browser
ZmLBD12 GRMZM2G447176 LBD12 pUT4743 View in Browser
ZmLBD13 GRMZM2G011385 LBD13 pUT4070 View in Browser
ZmLBD14 GRMZM2G177110 LBD14 pUT6785 View in Browser
ZmLBD15 AC207888.3_FG009 LBD15 pUT6544 View in Browser
ZmLBD16 AC233943.1_FG002 RA2 pUT5559 View in Browser
ZmLBD17 GRMZM2G132693 LBD17 pUT4742 View in Browser
ZmLBD18 AC218973.3_FG003 LBD18 View in Browser
ZmLBD19 GRMZM2G118250 IG1 pUT6740 View in Browser
ZmLBD20 GRMZM2G092517 LBD20 pUT5660 View in Browser
ZmLBD21 GRMZM2G025758 LBD21 pUT5666 View in Browser
ZmLBD22 GRMZM2G095982 LBD22 pUT5717 View in Browser
ZmLBD23 GRMZM2G079768 LBD23 pUT5716 View in Browser
ZmLBD24 GRMZM2G075499 LBD24 pUT4745 View in Browser
ZmLBD25 GRMZM2G025989 LBD25 pUT4444 View in Browser
ZmLBD26 GRMZM2G079185 LBD26 pUT5577 View in Browser
ZmLBD27 GRMZM2G362627 LBD27 pUT5664 View in Browser
ZmLBD28 GRMZM2G165805 LBD28 View in Browser
ZmLBD29 GRMZM2G386095 LBD29 pUT5718 View in Browser
ZmLBD30 GRMZM2G180319 LBD30 View in Browser
ZmLBD31 GRMZM2G044150 LBD31 pUT4445 View in Browser
ZmLBD32 GRMZM2G121487 LBD32 pUT4744 View in Browser
ZmLBD33 GRMZM2G386674 LBD33 pUT6402 View in Browser
ZmLBD34 GRMZM2G704330 LBD34 View in Browser
ZmLBD35 GRMZM5G868471 LBD35 pUT4618 View in Browser
ZmLBD36 GRMZM2G096064 LBD36 pUT4031 View in Browser
ZmLBD37 AC234149.1_FG002 LBD37 pUT5713 View in Browser
ZmLBD38 GRMZM2G073044 LBD38 pUT5715 View in Browser
ZmLBD39 AC214648.3_FG005 LBD39 pUT4617 View in Browser
ZmLBD40 GRMZM2G133806 IAL1 pUT5672 View in Browser
ZmLBD41 GRMZM2G145568 LBD41 View in Browser
ZmLBD42 GRMZM2G150594 LBD42 pUT6767 View in Browser
ZmLBD43 AC149818.2_FG009 RTCL1 View in Browser
ZmLBD44 GRMZM5G873586 LBD44 pUT5574 View in Browser