Traffic analysis

Welcome to Transcription Factor Database

GrassTFDB provides a comprehensive collection of transcription factors from maize, sugarcane, sorghum and rice. Other grasses will be included as sequence information becomes available. Transcription factors, defined here specifically as proteins containing domains that suggest sequence-specific DNA-binding activities, are classified based on the presence of 50+ conserved domains. Links to resources that provide information on mutants available, map positions or putative functions for these transcription factors are provided. Transcription factors are being named using a standard nomenclature that will simplify references to them as well as comparative analyses between the grasses.

Browse families

Please select the species to browse the transcription factors

Browse All Families: Maize TFs Rice TFs Sorghum TFs Sugarcane TFs
 
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Search Transcription Factors

by gene identifier
Start typing and let me give gene identifier suggestions
(eg. LOC_Os01g01290, AC177820.3_FGT004, etc)

in batch
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BLAST Transcription Factors

Choose program to use and database to search:
Program Database
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Advanced Paramters Set
  

Search by location - Search homologs - Search by motif

Coming soon...

Phylogenetic Trees

In this section you can view or download trees of families. If this is first time you are using this feature in our site, please visit Help section for instructions.

Select Transcription Factor Family *

* Missing phylogenetic trees of transcription factors are expected to be completed by December 2008.