Protein ZmSBP30
ZmSBP30 is a protein in the SBP family.
Information
TF Name: ZmSBP30
Species: Maize
TF Family: SBP
Gene Name(Synonym): UB3
Uniprot ID: B7ZYE2
Subgenome: 2

Protein ZmSBP30

ZmSBP30 is a protein in the SBP family.

Overview of domains present in v5 transcripts
PF03110
Zm00001eb199880_T002
Zm00001eb199880_T001
Zm00001eb199880_T003
Zm00001eb199880_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d052890DAPseq no logo sequence fimo position
Zm00001d052890DAPseq no logo sequence fimo position
Zm00001d052890ChIPseq no logo sequence fimo position
Zm00001d052890PChIPseq no logo sequence fimo position

Interactions where ZmSBP30 is the regulator  
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There are 19373 protein-dna interactions that fit this criteria. download excel sheet

Interactions where ZmSBP30 is the target  
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There are 58 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb199880_T002 from maize genome v5

Amino Acid Sequence
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MEAGGASGGDDGDGQLHGLKFGKKIYFEDAGGSSSSGGSGSASATAPPATQQPSPPAASPRAAPGGGRRGRAAAGGAGPS
LPPAPPRCLVDGCNADLTDAKTYYCRHKVCEMHSKEPRVVVNGLELRFCQQCSRFHNLAEFDQQKKSCRKRLAGHNERRR
RPPPGPLASRYGRLAAPLGGTKKLLHFFLLGDLGDQSFSFFVSVANVPTLDPEEPGGRFRSFMLDFSYPRVPSAMRDGFP
AVRPGGERVPGSNIQWQAASLDPPPPHHQSAAAGYGAHSYGSPGSSSSSRPPVFPAGPELPPGGGCLAGVPTDSSCALSL
LSTQPWDAAGHSAGHGHGHAASLPATAGFDGNPVAMASSYIAPPSPWTDSRAHEGGRRNVPQLPPDVPLGDVHSGPGTHH
GQFSGELELALQGNRPAPAPRNGQGSAGAFDQAGSTTEWSL

MEAGGASGGDDGDGQLHGLKFGKKIYFEDAGGSSSSGGSGSASATAPPATQQPSPPAASPRAAPGGGRRGRAAAGGAGPS
LPPAPPRCLVDGCNADLTDAKTYYCRHKVCEMHSKEPRVVVNGLELRFCQQCSRFHNLAEFDQQKKSCRKRLAGHNERRR
RPPPGPLASRYGRLAAPLGGTKKLLHFFLLGDLGDQSFSFFVSVANVPTLDPEEPGGRFRSFMLDFSYPRVPSAMRDGFP
AVRPGGERVPGSNIQWQAASLDPPPPHHQSAAAGYGAHSYGSPGSSSSSRPPVFPAGPELPPGGGCLAGVPTDSSCALSL
LSTQPWDAAGHSAGHGHGHAASLPATAGFDGNPVAMASSYIAPPSPWTDSRAHEGGRRNVPQLPPDVPLGDVHSGPGTHH
GQFSGELELALQGNRPAPAPRNGQGSAGAFDQAGSTTEWSL

MEAGGASGGDDGDGQLHGLKFGKKIYFEDAGGSSSSGGSGSASATAPPATQQPSPPAASPRAAPGGGRRGRAAAGGAGPS
LPPAPPRCLVDGCNADLTDAKTYYCRHKVCEMHSKEPRVVVNGLELRFCQQCSRFHNLAEFDQQKKSCRKRLAGHNERRR
RPPPGPLASRYGRLAAPLGGTKKLLHFFLLGDLGDQSFSFFVSVANVPTLDPEEPGGRFRSFMLDFSYPRVPSAMRDGFP
AVRPGGERVPGSNIQWQAASLDPPPPHHQSAAAGYGAHSYGSPGSSSSSRPPVFPAGPELPPGGGCLAGVPTDSSCALSL
LSTQPWDAAGHSAGHGHGHAASLPATAGFDGNPVAMASSYIAPPSPWTDSRAHEGGRRNVPQLPPDVPLGDVHSGPGTHH
GQFSGELELALQGNRPAPAPRNGQGSAGAFDQAGSTTEWSL

MEAGGASGGDDGDGQLHGLKFGKKIYFEDAGGSSSSGGSGSASATAPPATQQPSPPAASPRAAPGGGRRGRAAAGGAGPS
LPPAPPRCLVDGCNADLTDAKTYYCRHKVCEMHSKEPRVVVNGLELRFCQQCSRFHNLAEFDQQKKSCRKRLAGHNERRR
RPPPGPLASRYGRLAAPLGGTKKLLHFFLLGDLGDQSFSFFVSVANVPTLDPEEPGGRFRSFMLDFSYPRVPSAMRDGFP
AVRPGGERVPGSNIQWQAASLDPPPPHHQSAAAGYGAHSYGSPGSSSSSRPPVFPAGPELPPGGGCLAGVPTDSSCALSL
LSTQPWDAAGHSAGHGHGHAASLPATAGFDGNPVAMASSYIAPPSPWTDSRAHEGGRRNVPQLPPDVPLGDVHSGPGTHH
GQFSGELELALQGNRPAPAPRNGQGSAGAFDQAGSTTEWSL

MEAGGASGGDDGDGQLHGLKFGKKIYFEDAGGSSSSGGSGSASATAPPATQQPSPPAASPRAAPGGGRRGRAAAGGAGPS
LPPAPPRCLVDGCNADLTDAKTYYCRHKVCEMHSKEPRVVVNGLELRFCQQCSRFHNLAEFDQQKKSCRKRLAGHNERRR
RPPPGPLASRYGRLAAPLGGTKKLLHFFLLGDLGDQSFSFFVSVANVPTLDPEEPGGRFRSFMLDFSYPRVPSAMRDGFP
AVRPGGERVPGSNIQWQAASLDPPPPHHQSAAAGYGAHSYGSPGSSSSSRPPVFPAGPELPPGGGCLAGVPTDSSCALSL
LSTQPWDAAGHSAGHGHGHAASLPATAGFDGNPVAMASSYIAPPSPWTDSRAHEGGRRNVPQLPPDVPLGDVHSGPGTHH
GQFSGELELALQGNRPAPAPRNGQGSAGAFDQAGSTTEWSL

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF03110
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Nucleotide Sequence
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GTTGGGACGGGGGACGGGGCTATAC...

GRMZM2G460544_T01 from maize genome v3


Related TFome: pUT4982

Amino Acid Sequence
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MEAGGASGGDDGDGQLHGLKFGKKIYFEDAGGSSSSGGSGSASATAPPATQQPSPPAASPRAAPGGGRRGRAAAGGAGPS
LPPAPPRCLVDGCNADLTDAKTYYCRHKVCEMHSKEPRVVVNGLELRFCQQCSRFHNLAEFDQQKKSCRKRLAGHNERRR
RPPPGPLASRYGRLAAPLGEEPGGRFRSFMLDFSYPRVPSAMRDGFPAVRPGGERVPGSNIQWQAASLDPPPPHHQSAAA
GYGAHSYGSPGSSSSSRPPVFPAGPELPPGGGCLAGVPTDSSCALSLLSTQPWDAAGHSAGHGHGHAASLPATAGFDGNP
VAMASSYIAPPSPWTDSRAHEGGRRNVPQLPPDVPLGDVHSGPGTHHGQFSGELELALQGNRPAPAPRNGQGSAGAFDQA
GSTTEWSL

Nucleotide Sequence
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TCACAGTCCCACAGTGCAGGAGGGA...

GRMZM2G460544_T02 from maize genome v3

Amino Acid Sequence
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MEAGGASGGDDGDGQLHGLKFGKKIYFEDAGGSSSSGGSGSASATAPPATQQPSPPAASPRAAPGGGRRGRAAAGGAGPS
LPPAPPRCLVDGCNADLTDAKTYYCRHKVCEMHSKEPRVVVNGLELRFCQQCSRFHNLAEFDQQKKSCRKRLAGHNERRR
RPPPGPLASRYGRLAAPLGEPGGRFRSFMLDFSYPRVPSAMRDGFPAVRPGGERVPGSNIQWQAASLDPPPPHHQSAAAG
YGAHSYGSPGSSSSSRPPVFP

Nucleotide Sequence
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TCACAGTCCCACAGTGCAGGAGGGA...

Zm00001d052890_T001 from maize genome v4

Amino Acid Sequence
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MEAGGASGGDDGDGQLHGLKFGKKIYFEDAGGSSSSGGSGSASATAPPATQQPSPPAASPRAAPGGGRRGRAAAGGAGPS
LPPAPPRCLVDGCNADLTDAKTYYCRHKVCEMHSKEPRVVVNGLELRFCQQCSRFHNLAEFDQQKKSCRKRLAGHNERRR
RPPPGPLASRYGRLAAPLGEEPGGRFRSFMLDFSYPRVPSAMRDGFPAVRPGGERVPGSNIQWQAASLDPPPPHHQSAAA
GYGAHSYGSPGSSSSSRPPVFPAGPELPPGGGCLAGVPTDSSCALSLLSTQPWDAAGHSAGHGHGHAASLPATAGFDGNP
VAMASSYIAPPSPWTDSRAHEGGRRNVPQLPPDVPLGDVHSGPGTHHGQFSGELELALQGNRPAPAPRNGQGSAGAFDQA
GSTTEWSL

Nucleotide Sequence
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GGCAACAGCGAGCCCTGCTGTCCCT...

Zm00001eb199880_T001 from maize genome v5

Amino Acid Sequence
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MEAGGASGGDDGDGQLHGLKFGKKIYFEDAGGSSSSGGSGSASATAPPATQQPSPPAASPRAAPGGGRRGRAAAGGAGPS
LPPAPPRCLVDGCNADLTDAKTYYCRHKVCEMHSKEPRVVVNGLELRFCQQCSRFHNLAEFDQQKKSCRKRLAGHNERRR
RPPPGPLASRYGRLAAPLGEEPGGRFRSFMLDFSYPRVPSAMRDGFPAVRPGGERVPGSNIQWQAASLDPPPPHHQSAAA
GYGAHSYGSPGSSSSSRPPVFPAGPELPPGGGCLAGVPTDSSCALSLLSTQPWDAAGHSAGHGHGHAASLPATAGFDGNP
VAMASSYIAPPSPWTDSRAHEGGRRNVPQLPPDVPLGDVHSGPGTHHGQFSGELELALQGNRPAPAPRNGQGSAGAFDQA
GSTTEWSL

Nucleotide Sequence
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GTGCGCCAAAGATGGCATGCGGCTG...

Zm00001eb199880_T003 from maize genome v5

Amino Acid Sequence
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MEAGGASGGDDGDGQLHGLKFGKKIYFEDAGGSSSSGGSGSASATAPPATQQPSPPAASPRAAPGGGRRGRAAAGGAGPS
LPPAPPRCLVDGCNADLTDAKTYYCRHKVCEMHSKEPRVVVNGLELRFCQQCSRFHNLAEFDQQKKSCRKRLAGHNERRR
RPPPGPLASRYGRLAAPLGEPGGRFRSFMLDFSYPRVPSAMRDGFPAVRPGGERVPGSNIQWQAASLDPPPPHHQSAAAG
YGAHSYGSPGSSSSSRPPVFPAGPELPPGGGCLAGVPTDSSCALSLLSTQPWDAAGHSAGHGHGHAASLPATAGFDGNPV
AMASSYIAPPSPWTDSRAHEGGRRNVPQLPPDVPLGDVHSGPGTHHGQFSGELELALQGNRPAPAPRNGQGSAGAFDQAG
STTEWSL

Nucleotide Sequence
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GGGACGGGGCTATACCAACCAGCCA...

Zm00001eb199880_T004 from maize genome v5

Amino Acid Sequence
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MEAGGASGGDDGDGQLHGLKFGKKIYFEDAGGSSSSGGSGSASATAPPATQQPSPPAASPRAAPGGGRRGRAAAGGAGPS
LPPAPPRCLVDGCNADLTDAKTYYCRHKVCEMHSKEPRVVVNGLELRFCQQCSRFHNLAEFDQQKKSCRKRLAGHNERRR
RPPPGPLASRYGRLAAPLEEPGGRFRSFMLDFSYPRVPSAMRDGFPAVRPGGERVPGSNIQWQAASLDPPPPHHQSAAAG
YGAHSYGSPGSSSSSRPPVFPAGPELPPGGGCLAGVPTDSSCALSLLSTQPWDAAGHSAGHGHGHAASLPATAGFDGNPV
AMASSYIAPPSPWTDSRAHEGGRRNVPQLPPDVPLGDVHSGPGTHHGQFSGELELALQGNRPAPAPRNGQGSAGAFDQAG
STTEWSL

Nucleotide Sequence
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GTGCAGGAGGGAGTGGAAGAGAGTA...


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