Protein Information

Protein ZmMED26_5
ZmMED26_5 is a protein in the MED26 family.
Information
Coreg Name:	ZmMED26_5
Species:	Maize
Coreg Family:	MED26
Gene Name(Synonym):
Uniprot ID:	A0A1D6PDQ1

ZmMED26_5 is a protein in the MED26 family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
	PF08711
Zm00001eb054550_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Gene ID	Type	Sequence	FIMO	Position
Zm00001d033689	DAPseq	sequence	fimo	position
Zm00001d033689	DAPseq	sequence	fimo	position
Zm00001d033689	ChIPseq	sequence	fimo	position
Zm00001d033689	PChIPseq	sequence	fimo	position

Interactions where ZmMED26_5 is the regulator

There are no protein-dna interactions that fit this criteria.

Interactions where ZmMED26_5 is the target
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There are 6 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb054550_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MSLRRWKPFFPAFAAIDTAIETATGARSRDKFRQLRSELVEMLCDAADDDADRVKGLCRLLDAAMAEALSTLHVVPVTTT
MLTTTGVDKAVEGLLSHEAGKVRALAHGILIQWAEGGVLDTTVLAAPSTHRMHPQAQRPETAVLLAYTPKISDEKMPPVV
SNAGGDRVRSGQTGDAKRKHPGYYREADADDEKRQRNVPEKVEDRPRKMEPDIKSRSSWRSRDTKSRSRASSWRYRDERR

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF08711
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Nucleotide Sequence
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ATGTCGCTCCGCCGGTGGAAGCCCT...

AC230023.2_FGT002 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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ATGTCGCTCCGCCGGTGGAAGCCCT...

Zm00001d033689_T001 from maize genome v4

Amino Acid Sequence
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MLCDAADDDADRVKGLCRLLDAAMAEALSTLHVVPVTTTMLTTTGVDKAVEGLLSHEAGKVRALAHGILIQWAEGGVLDT
TVLAAPSTHRMHPQAQRPETAVLLAYTPKISDEKMPPVVSNAGGDRVRSGQTGDAKRKHPGYYREADADDEKRQRNVPEK
VEDRPRKMEPDIKSRSSWRSRDTKSRSRASSWRYRDERR

Nucleotide Sequence
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TGTCGCTCCGCCGGTGGAAGCCCTT...

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Protein ZmMED26_5

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmMED26_5 is the regulator

Interactions where ZmMED26_5 is the target
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Zm00001eb054550_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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Expand

AC230023.2_FGT002 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d033689_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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